Insertion junction: LMJ.RY0402.147921_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.147921
Chromosome:chromosome 1
Location:682823
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre01.g003550 (1 of 2) PTHR12231//PTHR12231:SF112 - CTX-RELATED TYPE I TRANSMEMBRANE PROTEIN // RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 14, CHLOROPLASTIC intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGCGCACCCGGGCGCCCGCTGCAGGTGAT
Internal bar code:TTACAACGACACGCGTTCTCC

Confirmation - LEAP-Seq

LEAP-Seq distance:258
LEAP-Seq percent confirming:98.6395
LEAP-Seq n confirming:145
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:GAGGTAAGCAGGCAGGTCAG
Suggested primer 2:GAGTGGTCGTCTCGAATGGT