Insertion junction: LMJ.RY0402.148131_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.148131
Chromosome:chromosome 17
Location:6897603
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre17.g745747 (1 of 3) PTHR12136//PTHR12136:SF47 - STEROIDOGENIC ACUTE REGULATORY PROTEIN STAR // STEROIDOGENIC ACUTE REGULATORY-LIKE PROTEIN 1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTTGACATGCCAGTGGCAGCCCTCTCTCC
Internal bar code:AGTATCGCGTGTGCGTAATTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:827
LEAP-Seq percent confirming:74.316
LEAP-Seq n confirming:842
LEAP-Seq n nonconfirming:291
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:AATGCGGAATCCTCAGTTTG
Suggested primer 2:CGAGCTCACCCAAGCTTTAC