Insertion junction: LMJ.RY0402.148169_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.148169
Chromosome:chromosome 9
Location:6443401
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre09.g407120 (1 of 781) IPR000104 - Antifreeze protein, type I 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGAATGTGTGGCATGACACGTGCACCCTG
Internal bar code:CGCATCGCTGGGAATTGGCGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:654
LEAP-Seq percent confirming:86.3008
LEAP-Seq n confirming:2060
LEAP-Seq n nonconfirming:327
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:ATAGGTATCGGCACCATTGC
Suggested primer 2:CTCACAGCAGTAGCAGCAGG