Insertion junction: LMJ.RY0402.148182_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.148182
Chromosome:chromosome 5
Location:1471536
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre05.g243800 CPLD45,PSB27 (1 of 1) K08902 - photosystem II Psb27 protein (psb27); conserved expressed protein involved in PSII biogenesis 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCACAGCGCGCCTGTTCCCATTCTCCCCG
Internal bar code:CAATCCCACTAAGGGATCGTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:210
LEAP-Seq percent confirming:90.7407
LEAP-Seq n confirming:49
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:ATGCGTAGATGACCCTGACC
Suggested primer 2:TACCAGCCCAAACTTAACCG