Insertion junction: LMJ.RY0402.148255_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.148255
Chromosome:chromosome 3
Location:6299183
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre03.g193200 (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGTACCCGCCCATGCCGCCGCCACCGCCG
Internal bar code:GCGCATCACGGGGACATACTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:682
LEAP-Seq percent confirming:41.1588
LEAP-Seq n confirming:959
LEAP-Seq n nonconfirming:1371
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:CCCCATCCACGACTTGTACT
Suggested primer 2:CTACATCCTCGGCTGGAGTC