Insertion junction: LMJ.RY0402.148387_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.148387
Chromosome:scaffold 36
Location:22568
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre36.g759697 (1 of 781) IPR000104 - Antifreeze protein, type I 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGATTCCTGGTTTCAGTCATTCCTGGTAT
Internal bar code:TATCTGTCATGTGCGGGTACTC

Confirmation - LEAP-Seq

LEAP-Seq distance:500
LEAP-Seq percent confirming:99.6674
LEAP-Seq n confirming:2997
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:TAATCAATTGGTGCCTGCAA
Suggested primer 2:GCTGCTCATACGCTACACCA