Insertion junction: LMJ.RY0402.148661_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.148661
Chromosome:chromosome 9
Location:5914987
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre09.g402589 (1 of 22) PTHR11017//PTHR11017:SF145 - LEUCINE-RICH REPEAT-CONTAINING PROTEIN // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCACACCAACGTCGCTAGCACGGCCAGGA
Internal bar code:GTCTCCCTGTAGTTGTTTTCCA

Confirmation - LEAP-Seq

LEAP-Seq distance:127
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:109
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:CCCGAAGGTTGTTTACGTGT
Suggested primer 2:ACCGCAATGAAAGTAATCCG