Insertion junction: LMJ.RY0402.149005_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.149005
Chromosome:chromosome 6
Location:928380
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre06.g255300 CGLD28 Conserved in the Green Lineage and Diatoms; (1 of 1) IPR000104//IPR025461 - Antifreeze protein, type I // Protein of unknown function DUF4281 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGCCGGCATCCAAGCTGGTGAGAGGTGAT
Internal bar code:GATGGCACTCTGTCGTCGGGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:740
LEAP-Seq percent confirming:90.4239
LEAP-Seq n confirming:576
LEAP-Seq n nonconfirming:61
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:CTTCGCCAAGCAGGAAATAG
Suggested primer 2:GCCATGACTACATCCAGGGT