Insertion junction: LMJ.RY0402.149153_3

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.149153
Chromosome:chromosome 12
Location:3339459
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre12.g497500 SNE7 (1 of 8) PTHR10366:SF411 - HIGH CHLOROPHYLL FLUORESCENCE PHENOTYPE 173 PROTEIN; Cinnamoyl-CoA reductase/flavanone 4-reductase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTGCCACCAAACCCTTTTCCTGTGCGCAT
Internal bar code:ATGGACGATTGGGGTTGATGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:975
LEAP-Seq percent confirming:86.9518
LEAP-Seq n confirming:1586
LEAP-Seq n nonconfirming:238
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:GCTGACCGGGTTACCAGTTA
Suggested primer 2:GCCGCTTCTACTGGTACTGC