Insertion junction: LMJ.RY0402.149262_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.149262
Chromosome:chromosome 17
Location:3809259
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre17.g727801 (1 of 80) IPR003882 - Pistil-specific extensin-like protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGAACTCGTCGCGCACTGGGGCTACTGGG
Internal bar code:ACTCCCCATACTGCTCGTCATGG

Confirmation - LEAP-Seq

LEAP-Seq distance:346
LEAP-Seq percent confirming:89.8148
LEAP-Seq n confirming:388
LEAP-Seq n nonconfirming:44
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:CAGCTACGAGTACGATGGCA
Suggested primer 2:CACCTGTGATCAGTGGGTTG