Insertion junction: LMJ.RY0402.149510_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.149510
Chromosome:chromosome 11
Location:2397794
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre11.g474850 PUS17 (1 of 2) 5.4.99.29 - 23S rRNA pseudouridine(746) synthase / 23S RNA Psi(746) synthase; RNA pseudouridine synthase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGCACGCACAACAGCACAGGACAGACATG
Internal bar code:GGGAGCTGACGGTGTCAAGGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1055
LEAP-Seq percent confirming:95.467
LEAP-Seq n confirming:2780
LEAP-Seq n nonconfirming:132
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:ATGCAGCTAGTACCGCACCT
Suggested primer 2:CACGTCCCACAGAAACACAC