Insertion junction: LMJ.RY0402.149510_3

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.149510
Chromosome:chromosome 11
Location:2397806
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre11.g474850 PUS17 (1 of 2) 5.4.99.29 - 23S rRNA pseudouridine(746) synthase / 23S RNA Psi(746) synthase; RNA pseudouridine synthase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GACGACATTTATCACCGGCGCCGCTTGCCT
Internal bar code:ATCGAGTACGTAAATCGGTCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:871
LEAP-Seq percent confirming:98.4526
LEAP-Seq n confirming:1018
LEAP-Seq n nonconfirming:16
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:CACGTCCCACAGAAACACAC
Suggested primer 2:ATGCAGCTAGTACCGCACCT