Insertion junction: LMJ.RY0402.149521_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.149521
Chromosome:chromosome 2
Location:6061647
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre02.g112750 (1 of 19) PTHR31251:SF1 - SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 10-RELATED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTACGCGACGTGTGGTGCGCAGTATGCAG
Internal bar code:GCCCTATCGCGGTTATCACTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1043
LEAP-Seq percent confirming:98.3906
LEAP-Seq n confirming:2262
LEAP-Seq n nonconfirming:37
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:GATGTGCGGGTGTCTAGGAG
Suggested primer 2:GCTCGAACAAAAGGAGTTGC