Insertion junction: LMJ.RY0402.149741_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.149741
Chromosome:chromosome 17
Location:3006994
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre17.g720400 HMA1 (1 of 1) PTHR24093:SF272 - CADMIUM/ZINC-TRANSPORTING ATPASE HMA1, CHLOROPLASTIC-RELATED; heavy metal transporting ATPase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATAATGCCCCGCAGCGCCTATCCGGTGGCG
Internal bar code:CATACCGTCACACCAGATGACG

Confirmation - LEAP-Seq

LEAP-Seq distance:582
LEAP-Seq percent confirming:99.5537
LEAP-Seq n confirming:2454
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:CGTAGTAACGGTCGGTTCGT
Suggested primer 2:GAAGTACGGCTTCACAAGGC