Insertion junction: LMJ.RY0402.149741_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.149741
Chromosome:chromosome 17
Location:3007003
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre17.g720400 HMA1 (1 of 1) PTHR24093:SF272 - CADMIUM/ZINC-TRANSPORTING ATPASE HMA1, CHLOROPLASTIC-RELATED; heavy metal transporting ATPase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGGGCCACTCGCGGCCCTCGCTGTAAGCG
Internal bar code:CTCGGCTTTATAACAAGAAGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:157
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:1143
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:CGTAGTAACGGTCGGTTCGT
Suggested primer 2:AGGCCGGTTGATACATGAAG