Insertion junction: LMJ.RY0402.149751_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.149751
Chromosome:chromosome 16
Location:3126409
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre16.g665650 HFLX1,HFLX Putative chloroplast GTP-bidning protein involved in ribosome hibernation or ribosome biogenesis; (1 of 1) K03665 - GTP-binding protein HflX (hflX) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGATGCGCAAACCCAACCGCTGCCTCCCAA
Internal bar code:CTCACTCCGTGGCTTGACAATA

Confirmation - LEAP-Seq

LEAP-Seq distance:260
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:370
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:AGGATAAGCGAGGCACAGAA
Suggested primer 2:TGTTGCACATACGTTTCGGT