Insertion junction: LMJ.RY0402.149761_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.149761
Chromosome:chromosome 3
Location:3863354
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre03.g171000 (1 of 1) IPR003072//IPR006569//IPR008942 - Orphan nuclear receptor, NOR1 type // CID domain // ENTH/VHS 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGAAATTCCAGCATGAAAGTCGTGATGCAG
Internal bar code:TTCAGTGAAGTCGTCACCCCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:822
LEAP-Seq percent confirming:99.4448
LEAP-Seq n confirming:13254
LEAP-Seq n nonconfirming:74
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:AAACAAATGGAGCAACCCAG
Suggested primer 2:TTCCTCATTATTGCTTGGGC