Insertion junction: LMJ.RY0402.149769_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.149769
Chromosome:chromosome 3
Location:2281932
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre03.g158050 PPP11 (1 of 1) PF00686//PF07228 - Starch binding domain (CBM_20) // Stage II sporulation protein E (SpoIIE) (SpoIIE); Phosphoprotein phosphatase 2C-related intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTGGGACATGGGACGGTGCCGGAGTGCCA
Internal bar code:ATTCGTTCTTTCTCTACTGTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:381
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:312
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:CTGCTCGATCTCATCGTCAA
Suggested primer 2:GTGGGGGTTCCTTGGATACT