Insertion junction: LMJ.RY0402.149781_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.149781
Chromosome:chromosome 9
Location:2992488
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre09.g387550 CGL142 Conserved in the Green Lineage CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACAGCGCCACGCCCCAGTTGTACAGAGCCG
Internal bar code:GGGTGTTCAGGGCGTGACAGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:626
LEAP-Seq percent confirming:99.6183
LEAP-Seq n confirming:2088
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:CGCATGAAGGAGAAGTCACA
Suggested primer 2:CATCAGGCTGAGCTGTGGTA