Insertion junction: LMJ.RY0402.149781_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.149781
Chromosome:chromosome 9
Location:2992490
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre09.g387550 CGL142 Conserved in the Green Lineage CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GACATGGCGCGACTGCTCAAGGAGTCAGAC
Internal bar code:TAGTGAATCAGTCTAAGTCGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:411
LEAP-Seq percent confirming:98.7342
LEAP-Seq n confirming:468
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:CGCATGAAGGAGAAGTCACA
Suggested primer 2:CATCAGGCTGAGCTGTGGTA