Insertion junction: LMJ.RY0402.149802_3

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.149802
Chromosome:chromosome 9
Location:7122797
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre09.g411900 SHMT3 (1 of 3) 2.1.2.1 - Glycine hydroxymethyltransferase / Threonine aldolase; Serine hydroxymethyltransferase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGTCCATGTCGGCACGTTTCCATGCGCCG
Internal bar code:ACCGCTGCGCGTCTTGGTACCG

Confirmation - LEAP-Seq

LEAP-Seq distance:642
LEAP-Seq percent confirming:99.3151
LEAP-Seq n confirming:145
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:GAACCTTCGAGGAGTTGCTG
Suggested primer 2:TTGCCTTGCATGACTCTGAC