Insertion junction: LMJ.RY0402.150106_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.150106
Chromosome:chromosome 9
Location:3651736
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre09.g390467 CGL66 (1 of 3) PTHR12385:SF44 - PLASMA-MEMBRANE CHOLINE TRANSPORTER FAMILY PROTEIN; Conserved in the Green Lineage intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCGACAGCCGCGCCCCAGCCGGCCCTTCC
Internal bar code:GGTCTAGTCCCAGGTAGAGCCC

Confirmation - LEAP-Seq

LEAP-Seq distance:968
LEAP-Seq percent confirming:98.0507
LEAP-Seq n confirming:6187
LEAP-Seq n nonconfirming:123
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:TGTGTAACGTGGTCAAGGGA
Suggested primer 2:ATTTCCATCCCAGTGAGTGC