Insertion junction: LMJ.RY0402.150106_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.150106
Chromosome:chromosome 9
Location:3651736
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre09.g390467 CGL66 (1 of 3) PTHR12385:SF44 - PLASMA-MEMBRANE CHOLINE TRANSPORTER FAMILY PROTEIN; Conserved in the Green Lineage intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGAGTGCTGGGGCCCAAACTCCGGAAGTT
Internal bar code:AAGTGGTTGTCAAGTCAAAATG

Confirmation - LEAP-Seq

LEAP-Seq distance:463
LEAP-Seq percent confirming:98.374
LEAP-Seq n confirming:605
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:TGTGTAACGTGGTCAAGGGA
Suggested primer 2:ATTTCCATCCCAGTGAGTGC