Insertion junction: LMJ.RY0402.150237_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.150237
Chromosome:chromosome 9
Location:1828895
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre09.g395950 AOX1 Alternative oxidase, mitochondrial; (1 of 2) PTHR31803//PTHR31803:SF3 - FAMILY NOT NAMED // ALTERNATIVE OXIDASE CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGGCAGCAGGCGTGCTCACGGCGCCCTGT
Internal bar code:GAGGACGCCCAGTGCAAGAGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:572
LEAP-Seq percent confirming:99.8837
LEAP-Seq n confirming:859
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:TAGCCCAGTAACCCCCTCTT
Suggested primer 2:GCGTAAATCCTCTCTCGCAC