Insertion junction: LMJ.RY0402.150308_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.150308
Chromosome:chromosome 5
Location:3427307
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre05.g241250 (1 of 1) IPR000104//IPR000253//IPR001357 - Antifreeze protein, type I // Forkhead-associated (FHA) domain // BRCT domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCCTCCAAGGCCTCCTCCAGCTGCTGCTC
Internal bar code:TTTTAGTGGTGCTTACCCAAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:479
LEAP-Seq percent confirming:99.617
LEAP-Seq n confirming:4161
LEAP-Seq n nonconfirming:16
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:GTACGGCTTCCATTTCTCCA
Suggested primer 2:CTGCTCCTCTTCCTCCTCCT