Insertion junction: LMJ.RY0402.150409_3

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.150409
Chromosome:chromosome_16
Location:3545128
Confidence (%):95
Locus systematic id Locus common name Defline Orientation Feature
Cre16.g678808 antisense 3'UTR

Insertion site details

Flanking sequence (orientation from cassette outwards):AGCGCAAAGGTAAGCCATACGCGGAGCCAT
Internal bar code:GTATCGTTTAAACACACTTACC

Confirmation - LEAP-Seq

LEAP-Seq distance:839
LEAP-Seq percent confirming:99.5633
LEAP-Seq n confirming:228
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:GAAGTTTCCAGCTTCAACGC
Suggested primer 2:GAACTCGGACATGTTCAGCA