Insertion junction: LMJ.RY0402.150553_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.150553
Chromosome:chromosome 14
Location:2386733
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre14.g624201 (1 of 1) PTHR10438//PTHR10438:SF247 - THIOREDOXIN // THIOREDOXIN-LIKE PROTEIN CDSP32, CHLOROPLASTIC 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCGTAGGTTGTTCTCTTCAACTCACACAT
Internal bar code:GGGGAGAACCAGACGAGCAATA

Confirmation - LEAP-Seq

LEAP-Seq distance:746
LEAP-Seq percent confirming:99.4318
LEAP-Seq n confirming:525
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:GAAGCGTGGAGCTTTTTCAG
Suggested primer 2:GGATTGGTGCAAGAGGGATA