Insertion junction: LMJ.RY0402.150619_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.150619
Chromosome:chromosome 8
Location:4374728
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre08.g381800 (1 of 2) 5.3.3.2 - Isopentenyl-diphosphate Delta-isomerase / Methylbutenylpyrophosphate isomerase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTAGTCACATGCCGCCAAGTCACGTGCCAG
Internal bar code:AATCTTTTGCCAATTGATCTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:510
LEAP-Seq percent confirming:98.0129
LEAP-Seq n confirming:1677
LEAP-Seq n nonconfirming:34
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:GCGGTGTGGAGTTATGGAGT
Suggested primer 2:TAATCGCCTCCAACACATCA