Insertion junction: LMJ.RY0402.150899_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.150899
Chromosome:chromosome 3
Location:8202175
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre03.g200050 CAL1 (1 of 2) PF13202//PF13833 - EF hand (EF-hand_5) // EF-hand domain pair (EF-hand_8); Calpain family cysteine protease CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGGCAACCTGCACTTCGGCATTTCAGACG
Internal bar code:GACCTTACTAGGGCGGGTGCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:714
LEAP-Seq percent confirming:99.0315
LEAP-Seq n confirming:818
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:GTAGATGCGGAGCTTTGGAG
Suggested primer 2:AAAATGGGAGACACGCAAAC