Insertion junction: LMJ.RY0402.151011_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.151011
Chromosome:chromosome 1
Location:4831239
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre01.g033500 (1 of 58) PTHR12393//PTHR12393:SF6 - SPHINGOMYELIN PHOSPHODIESTERASE RELATED // SPHINGOMYELIN PHOSPHODIESTERASE 2 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GACCTCCAACAACCATGTTCCACATGCATG
Internal bar code:GCTTCCGATACGGCCCCGGCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:466
LEAP-Seq percent confirming:97.8
LEAP-Seq n confirming:978
LEAP-Seq n nonconfirming:22
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:GAATGGGTTCAAGGGGATTT
Suggested primer 2:CTACATGCACACATCCTGGG