Insertion junction: LMJ.RY0402.151031_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.151031
Chromosome:chromosome 17
Location:1561190
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre17.g707500 TOC120,TOC159 Translocon at the outer envelope membrane of chloroplasts, receptor subunit; (1 of 1) PF11886 - Translocase of chloroplast 159/132, membrane anchor domain (TOC159_MAD) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCGGGGGTGGGGGGCGGGGGCCGGGGCGG
Internal bar code:GCCGCCAGAGTGTAATTCGATA

Confirmation - LEAP-Seq

LEAP-Seq distance:416
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:49
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:CCAGCAGCACACAAACACTT
Suggested primer 2:GGAGTGCCCTACCACCACTA