Insertion junction: LMJ.RY0402.151139_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.151139
Chromosome:chromosome 17
Location:3303516
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre17.g723250 CPP1,CPE1 chloroplast processing enzyme; (1 of 1) PTHR11851//PTHR11851:SF152 - METALLOPROTEASE // PROTEIN UCR-2.3 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTCCTAGTCATGTAATCCGCGCATACAGT
Internal bar code:GTGCGTAACTCGGTGGTACAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1089
LEAP-Seq percent confirming:99.1455
LEAP-Seq n confirming:4757
LEAP-Seq n nonconfirming:41
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:ACAAACTTGCAATAACCGGC
Suggested primer 2:TGCATACGTCACTCTGCTCC