Insertion junction: LMJ.RY0402.151209_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.151209
Chromosome:chromosome 5
Location:3072296
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre05.g238950 CGLD33 (1 of 5) 2.1.1.34 - tRNA (guanosine(18)-2'-O)-methyltransferase / tRNA (Gm18) methyltransferase; Conserved in the Green Lineage and Diatoms intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTGTGTGATGCCGCGCTTCACTTGCCGCC
Internal bar code:ACCCTCGTAAGACGTTGGGGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1049
LEAP-Seq percent confirming:98.6928
LEAP-Seq n confirming:151
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:CACACACACACACACACGGT
Suggested primer 2:GGGCTTGACTTCACAGAAGC