Insertion junction: LMJ.RY0402.151283_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.151283
Chromosome:chromosome 8
Location:4375040
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre08.g381800 (1 of 2) 5.3.3.2 - Isopentenyl-diphosphate Delta-isomerase / Methylbutenylpyrophosphate isomerase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGTATGTCAACATTGGCGCAAGCTACCCC
Internal bar code:TGGATCGTGGTCGGAATATTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:907
LEAP-Seq percent confirming:95.881
LEAP-Seq n confirming:19623
LEAP-Seq n nonconfirming:843
LEAP-Seq n unique pos:87

Suggested primers for confirmation by PCR

Suggested primer 1:TAGACATGCCTCACTGCCTG
Suggested primer 2:TGCGTGTATGTATGGGAGGA