Insertion junction: LMJ.RY0402.151299_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.151299
Chromosome:chromosome 17
Location:2688167
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre17.g717850 PHC8 (1 of 1) IPR003882//IPR024616//IPR027417 - Pistil-specific extensin-like protein // Pherophorin // P-loop containing nucleoside triphosphate hydrolase; Pherophorin-chlamydomonas homolog 8 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCCGCACATGGTCTTCCGTGGGAACATGG
Internal bar code:AGACGTGTGTCTGAGGCGGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:942
LEAP-Seq percent confirming:99.3355
LEAP-Seq n confirming:299
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:CCCTAGCATGGGTTCACTGT
Suggested primer 2:TGGAGACCACGATGGTGTAA