Insertion junction: LMJ.RY0402.151323_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.151323
Chromosome:chromosome 2
Location:6941298
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre02.g120100 RBCS1 (1 of 2) K01602 - ribulose-bisphosphate carboxylase small chain (rbcS); Ribulose-1%252C5-bisphosphate carboxylase/oxygenase small subunit 1, chloroplastic 5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATACCGCAGCCAGCTTCCGTCAGCCAGCC
Internal bar code:CCCGGGAGAGGTTATCGGTGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1177
LEAP-Seq percent confirming:76.1806
LEAP-Seq n confirming:1468
LEAP-Seq n nonconfirming:459
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:GCTTTTGGAAAAGTTGCTGC
Suggested primer 2:TACTCGGTATCCCTTGGTGC