Insertion junction: LMJ.RY0402.151334_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.151334
Chromosome:chromosome 17
Location:2487932
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre17.g716050 (1 of 1) PTHR20953:SF2 - PROTEIN SEEDLING PLASTID DEVELOPMENT 1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTCCAGCCAAACACTCCAAACCCCCAATA
Internal bar code:AATGTGGGTTGGATCAGTAATT

Confirmation - LEAP-Seq

LEAP-Seq distance:51
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:56
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:TTTAGGGAACATGGCTGGAG
Suggested primer 2:GGACTCCTGCTTCTCCTCCT