Insertion junction: LMJ.RY0402.151536_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.151536
Chromosome:chromosome 1
Location:7235415
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre01.g052100 PRPL18 (1 of 1) K02881 - large subunit ribosomal protein L18 (RP-L18, MRPL18, rplR); Chloroplast ribosomal protein L18 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCGCCTCCGCAAAAAGGTGACATATTATG
Internal bar code:TGATTTGGGCTTTGCGGAGCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:138
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:279
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:ACCTTCTCAATGTTGTGGGC
Suggested primer 2:GCCGCCTAGAGTTGACTACG