Insertion junction: LMJ.RY0402.151556_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.151556
Chromosome:chromosome 10
Location:3643379
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre10.g445650 SMC3 (1 of 1) K06669 - structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6) (SMC3, CSPG6); Structural Maintenance of Chromosomes protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCTCCCTGCAAGCACTTTCCCTCGCGAGG
Internal bar code:GGAAGGTCCGGTGTATGTGTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:720
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:703
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:AAAATGCAGTACCGGACGAC
Suggested primer 2:GACACTGGAATGCCAAACCT