Insertion junction: LMJ.RY0402.151619_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.151619
Chromosome:chromosome 4
Location:3277183
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre04.g226750 (1 of 10) PTHR31867:SF1 - EXPANSIN-A1-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATGCAATCCCGTTTATCACCCCCGCGGCC
Internal bar code:CACCCGGCATTGAAAGCTTTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:878
LEAP-Seq percent confirming:97.7064
LEAP-Seq n confirming:213
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:CTGCCTGTGGTGCTACTTCA
Suggested primer 2:GAAGTGTCAGGGCATACGGT