Insertion junction: LMJ.RY0402.151905_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.151905
Chromosome:chromosome 17
Location:2690536
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre17.g717850 PHC8 (1 of 1) IPR003882//IPR024616//IPR027417 - Pistil-specific extensin-like protein // Pherophorin // P-loop containing nucleoside triphosphate hydrolase; Pherophorin-chlamydomonas homolog 8 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTTCCTTCGAGAGGCTGGCTGCCGCGCTC
Internal bar code:GTCGCCTTGAGGTCGGCCGTCC

Confirmation - LEAP-Seq

LEAP-Seq distance:540
LEAP-Seq percent confirming:99.8628
LEAP-Seq n confirming:728
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:AGAACCGTTGCAGTACGCTT
Suggested primer 2:TCCTGCGAGCGTTCTTTATT