Insertion junction: LMJ.RY0402.152458_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.152458
Chromosome:chromosome 7
Location:520906
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre07.g316100 (1 of 1) PTHR21512//PTHR21512:SF5//PTHR32523//PTHR32523:SF8 - FAMILY NOT NAMED // TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 9 // FAMILY NOT NAMED // PHYTOL KINASE 1, CHLOROPLASTIC CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTTGCTGGTGTTCCTCAGCGCCACGCACA
Internal bar code:CAAGAGGGGCGCCCTAATACTT

Confirmation - LEAP-Seq

LEAP-Seq distance:624
LEAP-Seq percent confirming:53.258
LEAP-Seq n confirming:613
LEAP-Seq n nonconfirming:538
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:AAGCGTGTGTAGCTCTGTGC
Suggested primer 2:AGTCCATGTCCAGCTTCCAC