Insertion junction: LMJ.RY0402.152527_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.152527
Chromosome:chromosome 4
Location:2673905
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre04.g223150 NCL1,CLR18,OPR20 (1 of 1) IPR008920 - Transcription regulator FadR/GntR, C-terminal; Nuclear Control of chloroplast Like 1 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAAGATTGGGCTTGAAGGGGGGCCAGGGCC
Internal bar code:GGCGCAGATTGCTCGGTAATTT

Confirmation - LEAP-Seq

LEAP-Seq distance:901
LEAP-Seq percent confirming:91.5907
LEAP-Seq n confirming:1808
LEAP-Seq n nonconfirming:166
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:AACGAGTGAGTGAAGGGGTG
Suggested primer 2:TTGACCGAAGCCCATATCTC