Insertion junction: LMJ.RY0402.152691_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.152691
Chromosome:chromosome 3
Location:7301910
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre03.g206950 (1 of 1) PF05183 - RNA dependent RNA polymerase (RdRP) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCGCATGCGCTGCACAAAGAACCGTTTTG
Internal bar code:TACTTCCGGCCCAACTAAACTT

Confirmation - LEAP-Seq

LEAP-Seq distance:618
LEAP-Seq percent confirming:99.6119
LEAP-Seq n confirming:3080
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:GGGTTCTCGCTGAGAGATTG
Suggested primer 2:GACGGACACTTGGTGGACTT