Insertion junction: LMJ.RY0402.152811_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.152811
Chromosome:chromosome 3
Location:3916582
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre03.g171387 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATTTTGCTGCCCCCGAACTAGGCCCGTTC
Internal bar code:ATTGAGATATGTATATCTCCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:672
LEAP-Seq percent confirming:69.3432
LEAP-Seq n confirming:9966
LEAP-Seq n nonconfirming:4406
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:TGGGTGTGCTGTTTCTCAAG
Suggested primer 2:TTAAAGCGTGCTGTGAATGG