Insertion junction: LMJ.RY0402.152928_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.152928
Chromosome:chromosome 14
Location:877191
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre14.g613450 CGL87 (1 of 1) PTHR12818:SF0 - NEF-ASSOCIATED PROTEIN 1; Conserved in the Green Lineage CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGTCAAGGCGTAGGCTTGCAGCGTGTGCG
Internal bar code:GGGTAACCTAGGGGTCGGGTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:286
LEAP-Seq percent confirming:51.1312
LEAP-Seq n confirming:1582
LEAP-Seq n nonconfirming:1512
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:GGGGTGTCGCTTATGAGTGT
Suggested primer 2:AACATTCGAAACAGAACCCG