Insertion junction: LMJ.RY0402.153083_3

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.153083
Chromosome:chromosome 6
Location:1200468
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre06.g257600 FA1 (1 of 4) PF13516 - Leucine Rich repeat (LRR_6); Flagellar Autonomy Protein CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCTTGAGGGCGTCGGGGGGCAACAGCGCC
Internal bar code:CACTCCCCGCGACGAGACGGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:476
LEAP-Seq percent confirming:99.7921
LEAP-Seq n confirming:480
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:GCGCAATGCTGTGTACTTGT
Suggested primer 2:CCATGCATTGACCATCAGTC