Insertion junction: LMJ.RY0402.153177_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.153177
Chromosome:chromosome 3
Location:1302846
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre03.g150350 CPLD70 Conserved in the Plant Lineage and Diatoms; (1 of 5) K14326 - regulator of nonsense transcripts 1 (UPF1, RENT1) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTCAATACTGGCGCAAACCGCGGGCCACG
Internal bar code:CTGGACATTAGGCCACTAGCCG

Confirmation - LEAP-Seq

LEAP-Seq distance:994
LEAP-Seq percent confirming:97.5927
LEAP-Seq n confirming:6527
LEAP-Seq n nonconfirming:161
LEAP-Seq n unique pos:44

Suggested primers for confirmation by PCR

Suggested primer 1:GAGCTTGAAGAGGAGGAGGC
Suggested primer 2:ACAGAGCTCCTTGGGTGAGA