Insertion junction: LMJ.RY0402.153416_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.153416
Chromosome:chromosome 12
Location:5611061
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre12.g532050 (1 of 1) PF00069//PF04564//PF07714//PF12796 - Protein kinase domain (Pkinase) // U-box domain (U-box) // Protein tyrosine kinase (Pkinase_Tyr) // Ankyrin repeats (3 copies) (Ank_2) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTGCAGGCCGCTGAGGATGCGGACCTCCG
Internal bar code:AGTGGGATCCCGGGTTAAGTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:669
LEAP-Seq percent confirming:94.4114
LEAP-Seq n confirming:794
LEAP-Seq n nonconfirming:47
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:GACTTGAGCAGAGGTCAGGG
Suggested primer 2:TACAGCTATGACGACCTGCG