Insertion junction: LMJ.RY0402.153479_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.153479
Chromosome:chromosome 9
Location:2995236
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre09.g387550 CGL142 Conserved in the Green Lineage 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCGGAGCACAAGGGTTACTGGTGGCAGAG
Internal bar code:TCTTTAAGGTACTGTTTTTTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:826
LEAP-Seq percent confirming:99.4949
LEAP-Seq n confirming:985
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:GCCACACTCACGCAACATAC
Suggested primer 2:GTCTAAGAACGCCGACTTGC